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<div style="direction: ltr;font-family: Tahoma;color: #000000;font-size: 10pt;">Hello,<br>
<br>
I am a bit confused by a comment which I find in all MARTINI example md.mdp scripts concerning the tc-groups :<br>
<br>
It is stated there to couple groups separately:<br>
<br>
<< MARTINI -Normal temperature and pressure coupling schemes can be used. It<br>
; is recommended to couple individual groups in your system seperately>><br>
<br>
I am simulating a mixed dppc:dppg membrane (see below my parameters). Even these two different lipids-types should be coupled separately? (and how about Na+ (Qd particles) and water - also separately?)<br>
<br>
I would greatly appreciate any comment on this issue.<br>
<br>
Thanks a lot<br>
Markus<br>
<br>
<br>
<br>
<span style="font-style: italic;">my parameter:</span><br style="font-style: italic;">
<span style="font-style: italic;">; Temperature coupling:</span><br style="font-style: italic;">
<span style="font-style: italic;">tcoupl = berendsen</span><br style="font-style: italic;">
<span style="font-style: italic;">; Groups to couple separately:</span><br style="font-style: italic;">
<span style="font-style: italic;">tc-grps = DPPC DPPG W NAA Protein</span><br>
<br>
<br>
<br>
<br>
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