[gmx-users] g_energy

David van der Spoel spoel at xray.bmc.uu.se
Tue Apr 10 12:02:23 CEST 2007


mahbubeh zarrabi wrote:
> Dear GROMACS users
> I want to calculate free energy in complex,receptor
> and ligand .what are energy groups in md.mdp?
> protein,solution or protein,protein,solution
> thanks
please read the manual, chapter 3 etc. then look on the gromacs wesbite 
for tutorials.

> 
> 
>  
> ____________________________________________________________________________________
> Expecting? Get great news right away with email Auto-Check. 
> Try the Yahoo! Mail Beta.
> http://advision.webevents.yahoo.com/mailbeta/newmail_tools.html 
> _______________________________________________
> gmx-users mailing list    gmx-users at gromacs.org
> http://www.gromacs.org/mailman/listinfo/gmx-users
> Please search the archive at http://www.gromacs.org/search before posting!
> Please don't post (un)subscribe requests to the list. Use the 
> www interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/mailing_lists/users.php


-- 
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  	75124 Uppsala, Sweden
phone:	46 18 471 4205		fax: 46 18 511 755
spoel at xray.bmc.uu.se	spoel at gromacs.org   http://folding.bmc.uu.se
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++



More information about the gromacs.org_gmx-users mailing list