[gmx-users] minimization -- bugzilla or general advice?

David Mobley dmobley at gmail.com
Thu Mar 27 21:02:10 CET 2008


Berk,

>  Hmm. Is this different from how other packages handle this issue? I
>  have never had the recurring problems with minimization in GROMACS
>  that I have in other packages. Even though, strangely enough, water is
>  a common feature in most of the simulations I run.

That was backwards. I have recurring problems with minimization in
GROMACS that I've never had in other packages, even though I do
normally use water. That makes me wonder if there is a significant
difference with how this is handled in gromacs.

David



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