[gmx-users] Forces in source code

Петр Попов magistrpetrus at gmail.com
Sat Dec 11 23:28:15 CET 2010


To protein-protein and protein-lipid components, for example.

2010/12/12 David van der Spoel <spoel at xray.bmc.uu.se>:
> On 2010-12-11 22.52, Петр Попов wrote:
>>
>> Hello, dear gmx-users.
>>
>> I want to decompose PMF, but I can't use -rerun option for this
>
> decompose into what?
>
>> because I get this PMF due to pull force. And also .trr files are
>> large to do md with different energy groups to get PMF.
>> So, I need to adopt source code for this task.
>> Could you help me and give me any advices? - in what .c files are
>> forces and pull force are evaluated? Or from what I must start?
>>
>> Best regards,
>> Petr.
>
>
> --
> David van der Spoel, Ph.D., Professor of Biology
> Dept. of Cell & Molec. Biol., Uppsala University.
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