[gmx-users] Gromacs Installation

Mark Abraham Mark.Abraham at anu.edu.au
Tue Feb 15 06:39:12 CET 2011


On 15/02/2011 4:35 PM, majid hasan wrote:
> Okay, I'll do this. I have also realized after browsing through 
> config.log, that Xlib.h is absent. Where do I get it, I want it to run 
> ngmx.

You will need the X windowing system installed, and probably the 
associated "devel" packages. Use your distribution's package manager.

Mark

>
> Thanks,
> Majid
>
> ------------------------------------------------------------------------
> *From:* ZHAO Lina <lnzhao99 at gmail.com>
> *To:* Discussion list for GROMACS users <gmx-users at gromacs.org>
> *Sent:* Mon, February 14, 2011 9:07:15 PM
> *Subject:* Re: [gmx-users] Gromacs Installation
>
> "clean" reinstallation.
>
> make uninstall
> make distclean
> rm -r <the untar one>
>
> from source re-install it again.
>
> lina
>
> On Tue, Feb 15, 2011 at 12:39 PM, majid hasan <pu_majidhasan at yahoo.com 
> <mailto:pu_majidhasan at yahoo.com>> wrote:
>
>     Okay. Actually, second time, I over-worte the first installation.
>     I mean I didn't uninstall the first one, I just ran the whole
>     process again starting from fftw$./configure. I am not sure if
>     that is all right, I just did it to find out the problem. In the
>     third attempt (without issuing --enable-shared anywher), I again
>     over-wrote the gromacs installation files, and this went well. It
>     worked, but I don't know why?
>
>     Best,
>     Majid
>
>     ------------------------------------------------------------------------
>     *From:* ZHAO Lina <lnzhao99 at gmail.com <mailto:lnzhao99 at gmail.com>>
>
>     *To:* Discussion list for GROMACS users <gmx-users at gromacs.org
>     <mailto:gmx-users at gromacs.org>>
>     *Sent:* Mon, February 14, 2011 8:04:38 PM
>
>     *Subject:* Re: [gmx-users] Gromacs Installation
>
>     You are right, it's relevant to the shared libs.
>     but I don't know why you failed in the second attempt if you did a
>     clean reinstallation.
>
>     lina
>
>
>
>
> ------------------------------------------------------------------------
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> Enjoy some healthy debate
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