[gmx-users] PDB2GMX error in charmm27 Forcefield

[Mark Abraham]

On 22/04/2012 10:58 PM, sai nitin wrote:
> Hi all,
>
> Im using Charmm27 Forcefield to generate  topology of my protein by 
> using PDB2GMX tool but is showing
>
> Fatal Error
> Atom OG is used in an interaction of type atom in the topology
> database, but an atom of that name was not found in residue
> number 178.
>
> Can any body tell me how to solve this...

No. We don't know your pdb2gmx command line or what is in your system or 
what is happening at residue 178.

Mark