[gmx-users] trjconv -s

xy21hb xy21hb at 163.com
Tue Sep 16 16:05:34 CEST 2014


Dear all,


I have a .dcd trajectory with .psf from NAMD and would like to convert the trajectory to

GMX format .gro or .trr by using trjconv. 


Would it be possible to do this without generating .tpr?
If not, I wonder what other possible ways would be.
Thanks,


Yao





At 2014-09-16 09:59:45, "Mark Abraham" <mark.j.abraham at gmail.com> wrote:
>On Tue, Sep 16, 2014 at 3:51 PM, xy21hb <xy21hb at 163.com> wrote:
>
>> Dear all,
>>
>>
>> .tpr in trjconv is supposed to be optional, but it is in fact required.
>>  Any thoughts about that?
>>
>
>Ahem "in fact required for what I am trying to do" ;-) trjconv will insist
>on a .tpr file if you ask it to do something that needs information it can
>only get there. But since you haven't told us your trjconv command, or any
>detail below, then we can't really help.
>
>Mark
>
>I have a .dcd trajectory and .psf from NAMD and would like to convert to
>> GMX format.
>>
>>
>> Thanks,
>>
>>
>> Yao
>> --
>> Gromacs Users mailing list
>>
>> * Please search the archive at
>> http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before
>> posting!
>>
>> * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>>
>> * For (un)subscribe requests visit
>> https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or
>> send a mail to gmx-users-request at gromacs.org.
>>
>-- 
>Gromacs Users mailing list
>
>* Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting!
>
>* Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>
>* For (un)subscribe requests visit
>https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-request at gromacs.org.


More information about the gromacs.org_gmx-users mailing list