[gmx-users] POVPC MARTINI ff

Catarina A. Carvalheda dos Santos c.a.c.dossantos at dundee.ac.uk
Sun Dec 20 18:50:11 CET 2015


Well then check if there are publications in which these lipids were
simulated using Martini and search for a reference and/or email the
corresponding author.

Judging by the replies you've got so far the only way one can help you
further is by doing the job for you.

Good luck!

Cheers,
On 20 Dec 2015 17:43, "shivangi nangia" <shivangi.nangia at gmail.com> wrote:

> Nope, http://lipidbook.bioch.ox.ac.uk/lipid/ does not have POVPC.
>
>
>
> Shivangi Nangia, Ph. D
> Postdoctoral Research Associate
> Department of Molecular and Cell Biology
> University of Connecticut
>
> On Fri, Dec 18, 2015 at 10:22 AM, Catarina A. Carvalheda dos Santos <
> c.a.c.dossantos at dundee.ac.uk> wrote:
>
> > Try again =)
> >
> > On 17 December 2015 at 16:17, shivangi nangia <shivangi.nangia at gmail.com
> >
> > wrote:
> >
> > > Hello,
> > >
> > > Thanks for your reply.
> > >
> > > That weblink, however, is not working.
> > >
> > > Is there somewhere else I can look.
> > >
> > > CHARMM GUI MARTINI membrane builder also does not have POVPC MARTINI
> ff.
> > >
> > > Thanks,
> > > sxn
> > >
> > >
> > >
> > >
> > >
> > > On Thu, Dec 17, 2015 at 4:43 AM, Catarina A. Carvalheda dos Santos <
> > > c.a.c.dossantos at dundee.ac.uk> wrote:
> > >
> > > > Hi Shivangi,
> > > >
> > > > Check the Lipidbook @ http://lipidbook.bioch.ox.ac.uk
> > > >
> > > > Cheers,
> > > >
> > > > On 17 December 2015 at 04:14, shivangi nangia <
> > shivangi.nangia at gmail.com
> > > >
> > > > wrote:
> > > >
> > > > > Hello All,
> > > > >
> > > > > I am looking for MARTINI ff for POVPC, its not on MARTNI webpage.
> > > > >
> > > > > It will be great if anyone can help me with it.
> > > > >
> > > > > Thanks in advance.
> > > > >
> > > > > Regards,
> > > > > sxn
> > > > > --
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> > > > --
> > > > Catarina A. Carvalheda
> > > >
> > > > PhD Student
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> > Catarina A. Carvalheda
> >
> > PhD Student
> > Computational Biology Division
> > SSE & SLS
> > University of Dundee
> > DD1 5EH, Dundee, Scotland, UK
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