[gmx-users] ?==?utf-8?q? SAS for membrane protein

Maximilien LOPES RODRIGUES maximilien.lopesrodrigues at unamur.be
Tue May 24 15:35:24 CEST 2016


> The calculation group is protein + membrane, then choose just the protein for
> output.
> 
> -Justin


Hi Justin, thanks for replying so fast.

So I have to create a group protein + membrane using index.ndx but I don't understand how to output the protein only.
With the command gmx sasa, I just can choose the group of calculation and after that the program is already terminated, giving me a .xvg file and .pdb file.
Can you explain me more steps please ?

Thank you again !
Kind regards,
Max



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